FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009851

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009851
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences568212
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAACATG3050.00700072113.6536015
TTGGCCT3800.002020808912.7807817
TTGGATT4700.0098386710.3379462
TGGATTT8050.00693688087.7603393
ATTTTCC11052.5347894E-47.53728256
CAAAAAT9700.00445893557.168491
GATTCGT3000.0080492045.55051110-14
Produced by FastQC (version 0.11.5)