FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009852

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009852
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1039849
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCGCT8105.241966E-48.9080741
CTCCAAT7800.00369149338.32562351
TCCACTG8550.008721757.56535677
TTTCGGG10350.00608362636.94404757
ATTTCCC12550.0055174076.29944046
GATTTTG25556.413793E-75.90719655
Produced by FastQC (version 0.11.5)