FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009857

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009857
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences579060
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATGCTA3250.0081528313.3427362
TCCCACC3300.00901803713.1405742
GTCCGTC6405.744172E-410.2083951
CTCCTTT10701.0374627E-48.1412741
CCTGAAA8400.00679872567.7778251
CAAAAAA15700.0080509485.54851151
Produced by FastQC (version 0.11.5)