FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009865

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009865
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences764392
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTCAT4300.00712368110.7987821
CTCAAGG4950.001655362110.7208691
GTTGAAT5400.00340947469.8274631
CAACAAT7909.2758586E-59.2365711
CTTATAT7200.00382676358.2919221
CTTTAAT9003.8089888E-48.1076571
CTTTATT11751.2626706E-57.9037891
ATTTATG9456.505841E-47.7129876
CGATATT9650.00677804146.86648374
TTTATTT16007.2431366E-45.7982672
CTTTTCT13800.0052463465.76829341
CTTTTTT21753.7808815E-55.48982431
Produced by FastQC (version 0.11.5)