FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009866

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009866
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences859227
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTAAAT8708.289513E-610.0910551
CCTGTTT11051.3801834E-47.9449941
CATATCA9850.003157997.42742631
CTATAAT12700.00518608056.3367061
CTTCCTT18550.008083535.12712671
ATATTTC21300.00161035365.08704336
AGAAGTT18650.0099789125.03521823
Produced by FastQC (version 0.11.5)