FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009871

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009871
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4378313
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT15954.459107E-67.20074279
CACACGT16951.4317484E-67.19949777
CCCCCAC17306.964275E-45.81795071
ACACGTC22657.229589E-45.0707228
GATCTTA22757.6039584E-45.052535
Produced by FastQC (version 0.11.5)