FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009879

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009879
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1163949
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT3850.001818765812.9629619
CTACCAG10357.872357E-47.5773838
ATATTAC14807.5161504E-46.2625126
CTTTTAT22402.6997968E-66.08299261
CAATATT20159.167278E-45.3074164
Produced by FastQC (version 0.11.5)