FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009884

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009884
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2175779
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC7700.0044709648.1514018
CCCAAAT18555.918952E-56.04055361
CAAACAT23505.4876167E-55.36420441
CCGATTC17100.00541323665.30685333
CGAATTT21505.1370944E-45.19483043
CCAAATG19200.0037410715.0916262
ATCCGAT20900.00189344245.02626751
Produced by FastQC (version 0.11.5)