FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009885

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009885
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1288188
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATTTAG8100.00634207257.83987335
CTCAATT8350.0079737927.64192771
CCAATAA11603.6737262E-47.3000433
CTCCAAT11100.00175629177.02613741
TTGATTG10500.008349796.72067453
CTTCAAC13250.00158311286.42114261
CTCAAAA18703.6180764E-45.6871751
CCCGGAT15150.00706639565.61585041
AATATAC18100.00156509615.4575925
CTTTAAT18700.0022205335.308031
CTTTGAA20700.00141414345.1376891
CTTTCAT20900.00160661465.0885251
Produced by FastQC (version 0.11.5)