FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009886

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009886
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences757194
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGAAGGT6600.0087686878.7618461
GTGAAAT8400.00706752587.7448461
GTTTCTT12000.00325071886.62614631
CTGAAAA17650.0051965555.3241251
Produced by FastQC (version 0.11.5)