FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009889

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009889
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1195803
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGAT4553.9336877E-412.7255981
CTCCAAT8751.09407294E-49.0988031
GTTCAAT10650.0074972396.79594761
AATTTGC14700.00415563265.89126735
CCAAAAT18552.45088E-45.85257431
CTTTGAT18750.0017715345.4041371
CAAATTC21904.1444344E-45.27365263
AAGCCGC18300.0081000325.12669049
Produced by FastQC (version 0.11.5)