FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009891

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009891
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences935791
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTCTAA4252.5187462E-413.4142461
TTGAGGC5300.001646176410.72849752
GTTACAT6255.48105E-410.2618991
CCCAGAA7750.00389651288.2757251
CAGTAAA9000.00168569447.9181321
CGAATAT11101.9724574E-47.70412831
CTTTATT18556.5624245E-66.53085851
AATATTA15350.0080857685.5472495
CTTTCCG20700.00131977065.1639991
Produced by FastQC (version 0.11.5)