FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009892

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009892
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences811924
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTAAA4400.004551393411.4686511
CCCAAAT5850.00332264659.858281
CTTCAAC9452.6298346E-48.39127351
GTTTCAG9803.891914E-48.0915851
CTTTAAA11600.00234316086.83599421
ATTTACA12200.004147866.4737796
CTTTTAT16804.6035016E-46.0073891
CTTTCAG17400.00453812775.38593441
GGAAGAA25601.3337826E-45.0687341
Produced by FastQC (version 0.11.5)