FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009912

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009912
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences976123
Sequences flagged as poor quality0
Sequence length100-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAGAT1650.002701416421.8265291
GAGTAGT2902.0226426E-417.3156036
CACGTCT4451.2149849E-616.1204649
ACACGTC5203.6810889E-715.1749378
CACACGT5351.2200389E-412.067757
GAGCACA6809.557056E-510.5499624
AGAGCAC7502.2213891E-510.5218293
AGCACAC6557.937309E-49.8568645
GCACACG7850.00412118258.2245176
GTCAAAG9904.3828005E-48.0030591
AAGAGCA13151.6382092E-47.09541272
AATATAA10750.0089371876.67312245
AGTCACT3408.11334E-56.345515320-24
CTCGCGG15007.809767E-46.2423871
TTGGATC2950.00458698075.840103630-34
GAAGAGC18350.0085489245.10276841
Produced by FastQC (version 0.11.5)