FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009916

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009916
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4853909
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCAGT12900.0079061686.08588741
CTCGGAT21551.0150869E-55.96137141
CTTAAAG34951.6771082E-95.71783731
GTCTCAA21303.2906773E-45.36119131
GGTAGTT23802.8659246E-45.0979191
CCACGGA30854.278205E-65.08965641
CTTCCAC69300.05.0464251
Produced by FastQC (version 0.11.5)