FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009917

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009917
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1097277
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CATTGAG7603.4933825E-49.2771381
CCTCGAT9102.2249465E-48.5227341
CACCAAC8650.00126672848.1510111
ACATACC8000.0059831557.8907486
CTTACAA9050.00197815967.7907461
CCATCGC8450.0093184277.5095421
CATGAAT10250.00666820866.87865921
CATGGAT11850.00370296236.5448841
ATTCTGT15450.0093215355.47621351
CAATAAA20852.8790216E-45.41055151
AATATAC17150.00528886875.31673345
ATTCCAA17250.00566244035.2859128
CATCAAT17600.0067406345.2078481
Produced by FastQC (version 0.11.5)