FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009928

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009928
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences806644
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTAGTC400.006553972653.2871677
CACACAT2952.4055738E-416.926371
GATCAGT6250.0062538499.1305671
CAAAGGT9854.6037868E-47.9660721
ATATCCC8400.0082474017.61245356
CAAAAAT20209.397113E-45.2969721
Produced by FastQC (version 0.11.5)