FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009948

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009948
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences752902
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTGATCC4450.00497335811.3329583
GTTTAAT4500.005218114211.2601361
TTTGGGC6150.00505129959.3704928
GTTGGAA9150.00169955337.9111021
GCAATGC10550.0071563126.8280258
CAAAAAC14203.777568E-46.62694071
CTTCAAA12300.00414804236.4735971
Produced by FastQC (version 0.11.5)