FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009954

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009954
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences730256
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTCGAT6659.192546E-510.5896621
GAAGTAC6150.00631409379.1197195
CTTCAAT8157.0957834E-48.6406441
TCCGGGC7850.00506438738.0378427
ATTTTAA8050.00609899967.87318331
GTTCAAG8100.00644724867.82458351
CTGAAAT9100.00211109177.7385991
ACGATAT10050.0058107256.9763823
TTTTGCG17900.00147177815.48329456
CTTTTTT21905.8620574E-45.14493131
Produced by FastQC (version 0.11.5)