FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009967

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009967
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences544424
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTAGA500.003375441363.00441145
TGAGGTC3053.5087706E-416.1072798
CCGTGTA2750.003269764815.3123749
CCACTGG2850.004144347314.7764553
ATTTGAG4656.1138783E-412.0742736
CTGATAC5650.00300729419.9766341
Produced by FastQC (version 0.11.5)