FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009973

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009973
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1270756
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT3100.006044194613.9617771
CTCTATT10150.0048587927.106981
GTTCTAT12050.00347447026.5850151
CCTTCAT17801.460226E-46.07886361
GTTTGAT15750.00138052515.954071
CTTCAAA24707.539852E-55.25686361
Produced by FastQC (version 0.11.5)