FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009978

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009978
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1210013
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTGAT11151.9426722E-47.71475931
ATTTGAT13803.824396E-57.27218531
CATCAAT18002.7118322E-56.37181951
GTTGGAA12650.006159336.23330161
CTTCACC21408.4169715E-66.02940851
GAACAAG14250.00332525126.0102689
CTTTTAT18200.001373925.5140751
CAAAAAT24353.7588784E-45.00456051
Produced by FastQC (version 0.11.5)