FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009987

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009987
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1508568
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATTAG2550.001603433417.0397976
CTCTCAT10850.00109332717.3476361
CTTTTAT33654.5474735E-106.03056051
GTTCTCC16200.00182905345.8158481
CCTCCAT17859.349974E-45.6842681
AATATAG19554.952017E-45.55682375
Produced by FastQC (version 0.11.5)