FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009997

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009997
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences820528
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTGGATT7700.00314552668.4739761
ACGATAT9800.00361308837.32571363
TTCCGTT11954.2357488E-47.20923852
CCACGAT10150.00462254237.14281461
CAGCTTT16350.00228097995.7082323
CAAAAAA22455.5221823E-45.1670071
Produced by FastQC (version 0.11.5)