FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010007

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010007
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1756842
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCACGG10356.703962E-58.4543261
CTCCAAT12951.31159595E-57.88308761
CTCAGAT8350.0062037627.85948471
CTCCGAT10658.40548E-47.53149461
CTCATGG12003.7236183E-47.2918561
CTTGCTT16656.6782686E-67.0071891
CTCAAAC11600.00208031186.91469141
CACTCAT11700.00227729866.8555911
CGTTAAC10650.0069794416.8468131
CCCACAA10800.0079897556.75171851
CTCAAGC13200.00110490926.628961
CCCGCTT14404.1074704E-46.58292531
CTTTCGT13400.00131001676.530021
CTCAAAA20904.349886E-66.28006741
CCTGTAT16653.549421E-46.13129041
CTCCGTT14500.00318052626.03463941
CTTTCAA26801.1939446E-65.71376751
CAATATT32053.837158E-85.63250834
CTAAAAA20751.6647506E-45.6226361
CTTTTAC26455.725702E-65.5136911
Produced by FastQC (version 0.11.5)