FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010019

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010019
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences639532
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCCC800.00564229614.108178140-144
AACCCGG3600.001436988113.3734232
CAAAAGT8400.00108063318.2817511
CATCAAT11655.373235E-57.7628091
CGTAGCT2950.00729926075.600021435-39
Produced by FastQC (version 0.11.5)