FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010039

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010039
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1051085
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAACCGA4804.3453263E-513.4748281
CGAATTA5950.0041067899.6093014
ATTCAAC8950.00155126217.9853826
GTCAGAT8450.0078564997.654341
TTCAACG11000.00146584427.1469177
CTTGAAG12600.00575476056.2739941
TTCATCC20001.3040475E-45.718353
CAAAGAG15250.0065411365.655011
CTTTCAT20359.402016E-45.297231
Produced by FastQC (version 0.11.5)