FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010050

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010050
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences833293
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCAAT6106.9133076E-410.0058851
CTTCAAA13559.9056706E-88.5084891
CTCCAAG8250.00116423178.2203241
CTTTTTA11506.2859275E-57.66634461
CAATAAA9150.00322364397.4117661
TTTTCTC15155.228654E-67.1218627
CTTCGAT9750.00598283956.95565751
CTTTTCT16100.00399049935.44507276
Produced by FastQC (version 0.11.5)