FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010055

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010055
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1022801
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCACA3300.00891154313.1655991
CTCCGTT8205.352508E-59.7136431
CTATGTT6400.00672054949.051351
CTCATAG7200.00173038359.051351
AAACTCT10500.0066382666.88176634
CTCAAAA14150.00261351336.1408451
CTTTGTT17600.0049299515.34852461
CTCTTTT23251.6222316E-45.29455231
TTCCGTT18650.0099767355.03555739
Produced by FastQC (version 0.11.5)