FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010056

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010056
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1820363
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGATCG10550.0070183836.84291363
CTCCGGT23708.954921E-76.1216421
CCAAGCT14450.00324282846.02420431
AAATAGG14950.00500028775.7944176
CCAAAGT16450.00217212015.732761
GATTCAG16400.00221996785.7222815
AGATTCA17000.00339799965.52062134
CAAGAAG25602.1199075E-55.38393641
CTTCTGT23051.3900423E-45.3501291
Produced by FastQC (version 0.11.5)