FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010066

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010066
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences887330
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCAGTT6250.00545282069.2841551
GTTGGTT6200.0060163069.1738728
CTCAAAT9000.00141607168.0591621
CTTCCGA8200.0055239217.960881
TCATGTT8300.0073815187.7076319
CTTCCAA10900.0091807876.6543541
CTTTGAT16806.0975275E-56.4761131
CAATAAA18602.4658398E-45.84939241
CTTCAAA17406.672157E-45.83594471
Produced by FastQC (version 0.11.5)