FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010069

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010069
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2183032
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCCTAC6507.396763E-49.9340319
TTCCCTA11102.0509306E-69.0490168
CGAGTTG8150.00573227937.92920263
GTTGAAT18958.068089E-66.4460411
GTTTAAT20253.3040378E-66.38705731
CTCGTTG16704.4587566E-46.02372171
TTTCCCT29201.3588287E-65.40550337
CCCATTT20800.00126381875.1818071
GTTCTCT19600.00338662255.1324571
Produced by FastQC (version 0.11.5)