FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010071

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010071
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences568534
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACACGG2800.003023807715.4933641
CTTTGAA10751.0963231E-710.0887021
CCTTGAT7300.00198582658.9139911
AAAACAT10407.810948E-58.3418473
CTTGATT7900.00405998958.2369791
AATATTG10608.7330554E-47.50241575
CTTTGTT10300.00546791647.0196471
CATCAAT10650.0075578556.78895431
CTTTTAT13750.00192187586.31002471
Produced by FastQC (version 0.11.5)