FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005010080

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010080
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41190154
Sequences flagged as poor quality0
Sequence length20-151
%GC64

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGACGGTCCCCCGCGAGGGGGGCCCGGGCACCCGGGGGGCCGGCGGCGG2936250.7128523967159726No Hit
CGGACGGTCCCCCGCGAGGGGGGCCCGGGCACCCGGGGGGCCGGCGGCGG1999200.48535870975379214No Hit
GGGGAGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGCGCGCCGGCCG1970830.47847114142860453No Hit
GGGGAAACCCCCCCCGAGTGTTACAGCCCCCCCGGCAGCAGCACTCGCCG1776380.43126325771930835No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC1752400.42544147807750365No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG1632540.3963422909270988No Hit
GGGGGTCCCCCGCGAGGGGGGCCCGGGCACCCGGGGGGCCGGCGGCGGCG1484100.36030455239375897No Hit
GGCCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC1067100.25906676629565406No Hit
CGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC936520.2273650154354849No Hit
GGGGCGCGGCGCCTCGCCTCGGCCGGCGCCTAGCAGCCGACTTAGAACTG918940.22309700517264391No Hit
CGGGAAACCCCCCCCGAGTGTTACAGCCCCCCCGGCAGCAGCACTCGCCG896000.21752771305492083No Hit
GGGGCTCGCCGGCCGAGGTGGGATCCCGAGGCCTCTCCAGTCCGCCGAGG681380.16542302803723435No Hit
GGGCGGGGGGCCGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTTC667380.1620241575207512No Hit
GGGGGGTCAGTCGGTCCTGAGAGATGGGCGAGCGCCGTTCCGAAGGGACG592920.14394702190237016No Hit
GGGGAGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCGTCTCCTCGTGGGGG584680.14194654382695437No Hit
CGGGGTCCCCCGCGAGGGGGGCCCGGGCACCCGGGGGGCCGGCGGCGGCG547800.13299294778067594No Hit
GGCACGGTCCCCCGCGAGGGGGGCCCGGGCACCCGGGGGGCCGGCGGCGG543060.13184218733438094No Hit
CGGGAGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGCGCGCCGGCCG486980.11822728315121134No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG449130.1090381939334337No Hit
GGGACCGCGACGCGGCGCGTGCGCGGGCGGGGCCCGCGTGCCCGTTCGTT425050.1031921366450827No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)