FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010085

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010085
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1070865
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT4201.9645086E-919.9994289
CACACGT3901.8264473E-819.7430237
ACACGTC4103.2421667E-818.779958
AGCACAC6301.1059456E-915.5558365
AGAGCAC6852.2009772E-1015.3287443
GCACACG6251.6672857E-814.5602636
GAGCACA6704.1573003E-813.58233454
CCCAGGT4600.00784887310.6593331
AAGAGCA13053.1247873E-78.5857372
GAAGAGC11050.00190217776.97300961
GCCTTGT10500.00896437656.6711481
AAAAGAT28558.021201E-65.14895443
CAAAAAA30805.8708065E-65.00336071
Produced by FastQC (version 0.11.5)