FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010088

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010088
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1330346
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGATCCA4600.00689477110.84732156
CTCCGAT11300.0019127546.96964361
TCCAAAC10550.0078936556.7599282
CTTCAAT17752.2489132E-56.4538361
TCCAATT12250.0046501666.40399742
CATCAAT21451.3239351E-66.34194761
CTTCCAT19659.883572E-55.8298011
TCAATCC15100.0063859045.66759543
CTTGTCC18300.00149528165.4773851
Produced by FastQC (version 0.11.5)