FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010091

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010091
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences736730
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCATGT4908.188985E-411.6623463
GGGGGGG1150.002053463810.448835125-129
CTTTAAG6100.0049801089.3865961
CTCCGAA6600.0095084318.675491
CTCAAAA9000.001614197.95253231
CCGAAAT9000.00164586437.93687443
ATGATTT14400.00369705455.95265633
Produced by FastQC (version 0.11.5)