FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010092

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010092
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences584018
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCACGA3103.3967936E-416.176321
CCCGTAT4050.002564187412.3818741
CTCATAT4650.007191987710.7842131
AATGCAA6250.0062815859.124895
TCAAACT6350.0071360638.9842692
CTTTCTT10650.00101220187.3992291
TCCTTTT13900.0025445646.15437753
CGAGGGA3000.00391919075.9230523115-119
CTTTTTT18850.00214833675.3205931
Produced by FastQC (version 0.11.5)