FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010106

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010106
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences579496
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAGA3750.001310382313.5376211
CTCCGCT5450.001754344210.6455741
CAACAAT7650.0029541758.5321131
CTTTCAA10759.81066E-47.42095471
CTTTCCG11850.00274938976.732091
CTTCCTG10850.0087832426.6841451
CAAAAGA12100.00342272186.59299761
Produced by FastQC (version 0.11.5)