FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010113

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010113
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1074632
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTTGAC7954.1884684E-49.1104491
CTTCGAC7700.00317541028.4656191
CTCATCT7950.0042370298.1994041
CCAAGAT8150.00529867047.99819231
GTCCGGT8300.0062412897.85364631
GAAGTCG9400.00230946167.6689015
CTCATTT10608.582758E-47.5161211
GTGAATT10150.00486033557.1065322
ATATAAC10400.00619434576.9311846
CAATCTC10550.00709637076.83454474
CTTTAAT14153.5982247E-46.6541691
TTTGCCT15550.0011946256.0260618
CTTTGAT18150.00116360855.5867381
CAGATTT15550.0078193585.564333
Produced by FastQC (version 0.11.5)