FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010123

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010123
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2350796
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT7251.6906939E-49.9726551
TGAGTAG6557.7277975E-49.8868343
TAGCATG7703.253985E-49.3441028
GTGAGTA7850.0039439018.2656982
TTGCGTG10400.0063142676.91822969
GTCATGT13700.00185183926.33300071
AATTACG14200.00292497626.0802477
GTCAAAT21254.2729276E-55.78414061
CAATAGA19300.0027475265.21914154
CCGGAAT37451.9955769E-75.0196141
Produced by FastQC (version 0.11.5)