FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010125

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010125
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences729638
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTAGG850.002807008333.9537055
CACGAAT4250.003363954811.9419021
TCCGATA5950.00376650489.7097082
GAATTCC7600.00291464978.5454434
CCGGAAT9750.00311981967.436351
CTGCATT10550.00672029156.87245561
AAAAATT13600.00172347236.3719972
TTCCTAA3600.0066995315.211450690-94
Produced by FastQC (version 0.11.5)