FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010129

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010129
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1911042
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTAAGG7100.00163315919.1098426
CTCAGAT9452.5856867E-48.4058851
CTCTTAT9300.00204539677.7649671
GTCCAGT12758.3213946E-46.79662941
CCTACGG13100.00820323456.0637871
CTTCAAC23552.0517877E-45.2129141
AAATAAC18250.00824605955.11926036
Produced by FastQC (version 0.11.5)