FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010130

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010130
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1250404
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAACTAA6300.00898105810.467214145
TCCAACG7450.00243354088.7182867
TTCCCCG9150.00172348697.90080072
CTCGAAA9450.00236678647.64998152
GTTCCCG10300.005378367.033041
TCACATT12000.00325156036.62679622
CTTTCAG17658.145281E-45.7459741
CTTTAAC15300.00621318635.6815931
CTTTGGA20559.639093E-45.2876141
Produced by FastQC (version 0.11.5)