FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010136

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010136
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences661501
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTGGACT3050.00987915517.438541145
GACTACG4000.002619500512.347116
CAGAGAG4100.003029143212.1100351
CGCCTGA4400.005341178711.2246464
CTGATTT11400.00244520196.807933
TACATAG3450.00529361945.31718210-14
Produced by FastQC (version 0.11.5)