FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010137

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010137
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1976365
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCAACCT12600.00529317056.32526451
CTTTCGA17951.5444057E-46.054571
CTTCGCG15100.0053645965.7578571
CGAAAAA35505.81349E-85.30641941
CAAAAAA55300.05.24072551
AACAACC19300.0026507965.23398647
ACTTCGG19450.00292042045.1936216
Produced by FastQC (version 0.11.5)