FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010139

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010139
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences517948
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTCTGT3750.001501255613.2952198
GTCCGGT5300.001577141210.7820831
ATCCCGG5500.002199231410.3599118
GTTTCGG6550.0090731948.7244331
AAACATT8150.00613759467.8667894
Produced by FastQC (version 0.11.5)