FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010182

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010182
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1006638
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTAAA3200.00729423913.5705551
GGGGGGG1305.7489764E-511.09333175-79
TTTAAGC8050.0049371518.0612137
CTTCAAT15400.00101200586.1096881
CTTTTAT21709.013744E-66.00356341
CTTCCAT15250.00604787755.69518381
CTCTTTT21906.630093E-55.6182511
CCCCCCC3150.0081515995.5443506125-129
CTTTTTT35455.7352736E-85.3082751
CAACAAA18150.00711090545.1839771
CTTTTGT18250.0075823175.1555721
Produced by FastQC (version 0.11.5)