FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010188

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010188
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1058770
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAATGC6250.0058247429.21034058
GTTGAAT7650.00304429168.5051571
CTAAAAT9950.00391717637.2657121
CTGATAT17300.00434461385.40631683
CTTGAAA19100.00226700845.29902461
GATATCC18350.008665285.09696345
Produced by FastQC (version 0.11.5)