FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010193

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010193
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences843600
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCATAG5952.9892856E-410.9580011
CCCATGA6607.7745947E-49.8788041
CTTCGAT9803.651463E-69.6099941
CCTCGAT7803.451421E-49.2877651
CTTCGAG7650.0029861648.5228911
Produced by FastQC (version 0.11.5)